EMBOSS explorer

syco

Synonymous codon usage Gribskov statistic plot (read the manual)

Unshaded fields are optional and can safely be ignored. (hide optional fields)

Input section

Select an input sequence. Use one of the following three fields:

  1. To access a sequence from a database, enter the USA here:
  2. To upload a sequence from your local computer, select it here:
  3. To enter the sequence data manually, type here:

Codon usage table. Use one of the following two fields:

  1. To access a standard EMBOSS data file, enter the name here:
  2. To upload a data file from your local computer, select it here:
Advanced section
Averaging window
Show common codon usage?
Minimum value for a common codon
Output section
Produce plot?
Output graphic format
Graphic title
Graphic subtitle
X axis title
Y axis title
Run section
Email address: If you are submitting a long job and would like to be informed by email when it finishes, enter your email address here.